Cytoscape
Cytoscape is an open-source platform for visualizing and analyzing complex networks, originally designed for systems biology but now widely used across digital humanities to explore social, historical, and cultural relationships. With robust data integration features and support for diverse layout algorithms and visual styles, Cytoscape allows researchers to uncover patterns, clusters, and connections in datasets ranging from correspondence networks to literary character interactions. Its plugin ecosystem makes it highly extensible, enabling sophisticated analyses and interactive network storytelling that deepen humanities insights.
Cytoscape is an open-source platform for visualizing and analyzing complex networks, originally designed for systems biology but now widely used across digital humanities to explore social, historical, and cultural relationships. With robust data integration features and support for diverse layout algorithms and visual styles, Cytoscape allows researchers to uncover patterns, clusters, and connections in datasets ranging from correspondence networks to literary character interactions.